CDS

Accession Number TCMCG066C29414
gbkey CDS
Protein Id XP_034602808.1
Location complement(join(34141400..34141669,34141780..34141903,34141995..34142105,34142195..34142490,34142605..34142958,34143049..34143225,34143325..34143466,34143587..34143706,34143849..34143965,34144757..34144816,34144914..34145035,34145280..34145438))
Gene LOC117863280
GeneID 117863280
Organism Setaria viridis

Protein

Length 683aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034746917.1
Definition rhamnogalacturonate lyase-like isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain III
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCCGCTTCCGCGGCTGGCGCAACAAGGTCGTCATTGCTGCTGCCGGTCATCCTGCTCGTCGCCGCCGTCGGAGCATCATCGTCCCTCGCCGCCGCCGCGGCCGCACTGCCCAACGCCGCAGCCCATGGCGTTACGCTGCGCGTCGACCATCACCAGGTGCTTGTGGACAATGGCGTGGTGCAGGTGACGCTGTCCAAGCCGCAGGGCCACATCACCGCCGTCCGCTACAACGGCGAGCGCAGCCTCCTGCACTTCGCCGGCCAGGAGAACACGGGAGGGTACTGGGATGTGGTGTGGAACTATCCGGGCTCCGATCACCCAAGAGGGATGATCGACATGTTGGATAGTACGGAGTTCAAGGTCGTGTCCTCAAGCCCAGAGCAAGTGGAGCTTTCTTTCAGGAGTATATATAATCCATCACGCCAAGATAGTGTTAGACTAAACGTTGACAAAAGAATTGTGGTGCTGAAAGGCAGCTCCGGGTTCTACTGCTACGCCATCTTTGAGCACGCCAGCAACTGGCCTGCCATGAACATCTCAGAGGCTCGGCTCGCTTTCAAACTTAACACGGACAAGTTCAACTACATGGCGATTTCAGACGACATACAAAGATACATGCCCAGCGCGGCAGACAGAGACGAGCCTCGAGGTACTGCACTGGCCTACAAGGAGGCTGTTCTTCTCGTTAACCCCCAGGAGCCACAGTTCAAGGGAGAGGTGGATGACAAGTACCAGTACTCGCTGGACAACAAGGACAACGTCGTCCATGGATGGATCAGCAGCAATCACCCTAGCCCCATGGGCTTCTGGGTCATCACCCCAAGCAACGAGTTCAAGAGCGGCGGCCCCATGAAGAGGGAGCTCACCTCCCACGTTGGACCCACCTCCCTCACCATGTTTCTGGGAACGCATTACATTGGGGATGACATTGTCCTCAATGTTGGCAACGGCGAGTATTGGAAGAAGGTGTTGGGGCCAGTCTTCATCTACCTCAACTCGAGCCCGAAACACGGTGATCTCCGGGCTCTCTGGCAGGATGCCAAGGCGCAGGCGCAAACCGAAGTCAGCAAGTGGCCGTACAGCTTCCCTAAATCACCGGACTTCGCCAAGGCCGGCGAGAGGGGCTCCGTCACCGGAAGGCTCATGGTCAGAGACAGGTTCATGAGGAACGACGACATGCCTGCCGGGATGGCGTACATTGGCCTCGCCGCGCCCGGGCAGCCTGGCTCCTGGGCGACAGAGTGCAAGGGTTATCAGTTCTGGACGACGGCCACGTCCTGCGGCAGTTTCACCATCGGCAATGTCCGGGCAGGGGTGTACAACCTCTACGCATGGGTCCCCGGGGTTCTTGGAGACTACATGTACACTTCTGCTGTGACCGTAACGCCAGGTTGCGCCATCGACCTCGGTGATCTCGTGTTCTTGCCTCCAAGATCAGGCCCGACGCTGTGGGAGATCGGAGTCCCGGACCGGACCGCCGCGGAGTTCTTCATTCCTGACGTCGACCCCAGATACGCCAACCGGCTGTTTCTGCACAGGGACATGCAGTATGGTCTGTGGGAGAGGTACGCCGAGCTGTACCCTGACAGCGATCCTGTTTTCACGGTCGGTCGAAGCAACCACTCCAAGGACTGGTTCTTTGCACATGTCACAAGGAAGGTCGGCAATGGCAACGTGCCAACGACGCGTCAGATACGGTTCAACCTGGACCACGTCGTCGCGGACGGCACCTACACGCTGCGCATCGCCCTTGCAGCTGCTCAGATGTCCAGACTGCAGGTGCACGTGAACGGGGGCGGCATGAGGAGGGGGGGCGGGGTGTTCACGACGCCGGAGTTCGGCGGCGGCAACGCCATCGCGCGGCATGGCATCCACGGCGTGCAGTGGAGCTTCGAGTTCCCCATCAGAGGGTACCTGCTGGAAGAAGGCGAGAACAGGATCAGCATCACGCAGACGAGGGCCTTCGGCGAGTTCTTGGGGGTCATGTACGACTACATCCGCCTGGAAGGCCCTCCTGGATCCTGGCGAGACCCCACGCGACGGGCATGA
Protein:  
MAASAAGATRSSLLLPVILLVAAVGASSSLAAAAAALPNAAAHGVTLRVDHHQVLVDNGVVQVTLSKPQGHITAVRYNGERSLLHFAGQENTGGYWDVVWNYPGSDHPRGMIDMLDSTEFKVVSSSPEQVELSFRSIYNPSRQDSVRLNVDKRIVVLKGSSGFYCYAIFEHASNWPAMNISEARLAFKLNTDKFNYMAISDDIQRYMPSAADRDEPRGTALAYKEAVLLVNPQEPQFKGEVDDKYQYSLDNKDNVVHGWISSNHPSPMGFWVITPSNEFKSGGPMKRELTSHVGPTSLTMFLGTHYIGDDIVLNVGNGEYWKKVLGPVFIYLNSSPKHGDLRALWQDAKAQAQTEVSKWPYSFPKSPDFAKAGERGSVTGRLMVRDRFMRNDDMPAGMAYIGLAAPGQPGSWATECKGYQFWTTATSCGSFTIGNVRAGVYNLYAWVPGVLGDYMYTSAVTVTPGCAIDLGDLVFLPPRSGPTLWEIGVPDRTAAEFFIPDVDPRYANRLFLHRDMQYGLWERYAELYPDSDPVFTVGRSNHSKDWFFAHVTRKVGNGNVPTTRQIRFNLDHVVADGTYTLRIALAAAQMSRLQVHVNGGGMRRGGGVFTTPEFGGGNAIARHGIHGVQWSFEFPIRGYLLEEGENRISITQTRAFGEFLGVMYDYIRLEGPPGSWRDPTRRA